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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
GBM rs7773163 chr6:26267800 C/T 4.11E-11 149 12.37 10.48 0.73 KM Plot
GBM rs7863476 chr9:26915925 A/G 1.67E-6 149 2.73 10.87 11.95 KM Plot
GBM rs79213832 chr22:24313954 A/G 1.48E-7 142 11.9 12.73 1.62 KM Plot
GBM rs7945699 chr11:44163817 T/C 0.000115 146 11.42 13.13 2.27 KM Plot
GBM rs80249458 chr11:44113618 G/C 9.76E-5 147 11.4 12.32 2.27 KM Plot
GBM rs8055190 chr16:67391618 C/T 2.09E-7 149 11.95 9.9 0.97 KM Plot
GBM rs8056260 chr16:67476572 A/G 2.26E-7 148 12 9.55 0.97 KM Plot
GBM rs8060596 chr16:67452506 C/T 2.26E-7 148 12 9.55 0.97 KM Plot
GBM rs8100376 chr19:4778589 G/C 9.49E-5 142 10.75 12 3.23 KM Plot
GBM rs890850 chr19:8399849 C/A 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs890851 chr19:8399799 G/A 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs890852 chr19:8399709 C/A 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs915590 chr22:24261143 A/G 2.85E-7 149 2.4 9.93 12.67 KM Plot
GBM rs921982 chr16:67461429 G/C 2.26E-7 148 12 9.55 0.97 KM Plot
GBM rs951829 chr3:14712098 C/A 7.3E-5 149 1.1 12.73 10.87 KM Plot